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<li class="navelem"><a class="el" href="namespace_s_p_h.html">SPH</a></li><li class="navelem"><a class="el" href="class_s_p_h_1_1_network_tree.html">NetworkTree</a></li>  </ul>
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  <div class="summary">
<a href="#pub-methods">Public Member Functions</a> &#124;
<a href="#pub-attribs">Public Attributes</a> &#124;
<a href="#pro-attribs">Protected Attributes</a> &#124;
<a href="class_s_p_h_1_1_network_tree-members.html">List of all members</a>  </div>
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<div class="title">SPH::NetworkTree Class Reference</div>  </div>
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<p>Class that contains a <a class="el" href="class_s_p_h_1_1_network_tree.html" title="Class that contains a NetworkTree. ">NetworkTree</a>.  
 <a href="class_s_p_h_1_1_network_tree.html#details">More...</a></p>

<p><code>#include &lt;<a class="el" href="network_8h_source.html">network.h</a>&gt;</code></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:a4fd39bb01179ac1b675084ed2751f000"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a4fd39bb01179ac1b675084ed2751f000">NetworkTree</a> (<a class="el" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a> *body, Point starting_pnt, Point second_pnt, Real init_l, Real seg_l)</td></tr>
<tr class="separator:a4fd39bb01179ac1b675084ed2751f000"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1722db7387e77dc567d2f74fea8246cb"><td class="memItemLeft" align="right" valign="top"><a id="a1722db7387e77dc567d2f74fea8246cb"></a>
void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a1722db7387e77dc567d2f74fea8246cb">generateParticlesForSPHBody</a> ()</td></tr>
<tr class="memdesc:a1722db7387e77dc567d2f74fea8246cb"><td class="mdescLeft">&#160;</td><td class="mdescRight">This function creats particles for <a class="el" href="namespace_s_p_h.html">SPH</a> body based on the nodes growed in the network. <br /></td></tr>
<tr class="separator:a1722db7387e77dc567d2f74fea8246cb"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a59197a12597f1994bfa0f0e34c26f895"><td class="memItemLeft" align="right" valign="top"><a id="a59197a12597f1994bfa0f0e34c26f895"></a>
void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a59197a12597f1994bfa0f0e34c26f895">buildInnerConfigurationgForSPHBody</a> ()</td></tr>
<tr class="memdesc:a59197a12597f1994bfa0f0e34c26f895"><td class="mdescLeft">&#160;</td><td class="mdescRight">This function build inner configuration for <a class="el" href="namespace_s_p_h.html">SPH</a> body in 1D format. The neighboring particles consists of 4 particles, all from same branch, two from parent branch and two from local branch, or two from local branch and another two from child branchs. Note, particles located at end of branch only have two neighboring particles. <br /></td></tr>
<tr class="separator:a59197a12597f1994bfa0f0e34c26f895"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-attribs"></a>
Public Attributes</h2></td></tr>
<tr class="memitem:a6dc3553341fdb09fe95c988af35c560e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="class_s_p_h_1_1_node.html">Node</a> *&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a6dc3553341fdb09fe95c988af35c560e">node_</a></td></tr>
<tr class="separator:a6dc3553341fdb09fe95c988af35c560e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a6825176c8a63d6a66d75d5b0ff471251"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="class_s_p_h_1_1_branch.html">Branch</a> * &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a6825176c8a63d6a66d75d5b0ff471251">branches_</a></td></tr>
<tr class="separator:a6825176c8a63d6a66d75d5b0ff471251"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a0a818aa5f7e2078da5194505aaa88c6a"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classint.html">int</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a0a818aa5f7e2078da5194505aaa88c6a">last_branch</a></td></tr>
<tr class="separator:a0a818aa5f7e2078da5194505aaa88c6a"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae199bcabb7464c9b14f90a6bddd7494c"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="classint.html">int</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#ae199bcabb7464c9b14f90a6bddd7494c">branch_to_grow_</a></td></tr>
<tr class="separator:ae199bcabb7464c9b14f90a6bddd7494c"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-attribs"></a>
Protected Attributes</h2></td></tr>
<tr class="memitem:aa00b25d3bc5a6f9f41ca046e0a409ae1"><td class="memItemLeft" align="right" valign="top"><a id="aa00b25d3bc5a6f9f41ca046e0a409ae1"></a>
<a class="el" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a> *&#160;</td><td class="memItemRight" valign="bottom"><b>body_</b></td></tr>
<tr class="separator:aa00b25d3bc5a6f9f41ca046e0a409ae1"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a9eeebf7e29947154ba40c015b02c8ade"><td class="memItemLeft" align="right" valign="top"><a id="a9eeebf7e29947154ba40c015b02c8ade"></a>
<a class="el" href="class_s_p_h_1_1_base_level_set.html">BaseLevelSet</a> *&#160;</td><td class="memItemRight" valign="bottom"><b>levelset_mesh_</b></td></tr>
<tr class="separator:a9eeebf7e29947154ba40c015b02c8ade"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a5d7da958714fdda8648819479bab4da4"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classint.html">int</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a5d7da958714fdda8648819479bab4da4">n_it_</a> = 25</td></tr>
<tr class="separator:a5d7da958714fdda8648819479bab4da4"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a2d8b0f5acbe2bfd99c29b6cb8df3c493"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a2d8b0f5acbe2bfd99c29b6cb8df3c493">branch_angle_</a> = 0.15</td></tr>
<tr class="separator:a2d8b0f5acbe2bfd99c29b6cb8df3c493"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aaef80906afe7aee7e33c41aae928b7d7"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#aaef80906afe7aee7e33c41aae928b7d7">branch_w_</a> = 0.1</td></tr>
<tr class="separator:aaef80906afe7aee7e33c41aae928b7d7"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a81cec0f27e13b0c7a55745af4206d55d"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a81cec0f27e13b0c7a55745af4206d55d">length_</a></td></tr>
<tr class="separator:a81cec0f27e13b0c7a55745af4206d55d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a5627221439c36a9a00901971492e986d"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a5627221439c36a9a00901971492e986d">length_std_</a></td></tr>
<tr class="separator:a5627221439c36a9a00901971492e986d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a63ffd36144efdc6566a793e4cf47816b"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a63ffd36144efdc6566a793e4cf47816b">length_min_</a></td></tr>
<tr class="separator:a63ffd36144efdc6566a793e4cf47816b"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1c9fce9cf85cebb4dd6414f83ae26874"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classbool.html">bool</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a1c9fce9cf85cebb4dd6414f83ae26874">fascicles_</a> = true</td></tr>
<tr class="separator:a1c9fce9cf85cebb4dd6414f83ae26874"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad206e1e34981df417ef25dd65ee3e8cd"><td class="memItemLeft" align="right" valign="top">std::vector&lt; Real &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#ad206e1e34981df417ef25dd65ee3e8cd">fascicle_angles_</a> = {-1.5, 0.2}</td></tr>
<tr class="separator:ad206e1e34981df417ef25dd65ee3e8cd"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a605546cf821fd8dbbc30411965b4cedd"><td class="memItemLeft" align="right" valign="top">Real&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="class_s_p_h_1_1_network_tree.html#a605546cf821fd8dbbc30411965b4cedd">fascicle_ratio_</a> = 20.0</td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Class that contains a <a class="el" href="class_s_p_h_1_1_network_tree.html" title="Class that contains a NetworkTree. ">NetworkTree</a>. </p>
</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
<a id="a4fd39bb01179ac1b675084ed2751f000"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a4fd39bb01179ac1b675084ed2751f000">&#9670;&nbsp;</a></span>NetworkTree()</h2>

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          <td class="memname">SPH::NetworkTree::NetworkTree </td>
          <td>(</td>
          <td class="paramtype"><a class="el" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a> *&#160;</td>
          <td class="paramname"><em>body</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">Point&#160;</td>
          <td class="paramname"><em>starting_pnt</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">Point&#160;</td>
          <td class="paramname"><em>second_pnt</em>, </td>
        </tr>
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          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">Real&#160;</td>
          <td class="paramname"><em>init_l</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">Real&#160;</td>
          <td class="paramname"><em>seg_l</em>&#160;</td>
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        <tr>
          <td></td>
          <td>)</td>
          <td></td><td></td>
        </tr>
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<p>Add new branch. </p>
<dl class="params"><dt>Parameters</dt><dd>
  <table class="params">
    <tr><td class="paramname">body</td><td>Pointer to <a class="el" href="namespace_s_p_h.html">SPH</a> Body. </td></tr>
    <tr><td class="paramname">starting_pnt</td><td>Starting point of net work. </td></tr>
    <tr><td class="paramname">second_pnt</td><td>this point is only used to calculate the initial direction of the tree and is not included in the tree. </td></tr>
    <tr><td class="paramname">init_l</td><td>Initial length of the first branch. </td></tr>
    <tr><td class="paramname">seg_l</td><td>Length of the segments (approximately, because the lenght of the branch is random. </td></tr>
  </table>
  </dd>
</dl>

</div>
</div>
<h2 class="groupheader">Member Data Documentation</h2>
<a id="a2d8b0f5acbe2bfd99c29b6cb8df3c493"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a2d8b0f5acbe2bfd99c29b6cb8df3c493">&#9670;&nbsp;</a></span>branch_angle_</h2>

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          <td class="memname">Real SPH::NetworkTree::branch_angle_ = 0.15</td>
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<span class="mlabels"><span class="mlabel">protected</span></span>  </td>
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<p>angle with respect to the direction of the previous branch and the new branch. </p>

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<a id="ae199bcabb7464c9b14f90a6bddd7494c"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ae199bcabb7464c9b14f90a6bddd7494c">&#9670;&nbsp;</a></span>branch_to_grow_</h2>

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          <td class="memname">std::vector&lt;<a class="el" href="classint.html">int</a>&gt; SPH::NetworkTree::branch_to_grow_</td>
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<p>index of <a class="el" href="class_s_p_h_1_1_branch.html">Branch</a> to grow. </p>

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<a id="aaef80906afe7aee7e33c41aae928b7d7"></a>
<h2 class="memtitle"><span class="permalink"><a href="#aaef80906afe7aee7e33c41aae928b7d7">&#9670;&nbsp;</a></span>branch_w_</h2>

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          <td class="memname">Real SPH::NetworkTree::branch_w_ = 0.1</td>
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<p>epulsivity parameter. </p>

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<a id="a6825176c8a63d6a66d75d5b0ff471251"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a6825176c8a63d6a66d75d5b0ff471251">&#9670;&nbsp;</a></span>branches_</h2>

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          <td class="memname">std::vector&lt;<a class="el" href="class_s_p_h_1_1_branch.html">Branch</a>*&gt; SPH::NetworkTree::branches_</td>
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<p><a class="el" href="class_s_p_h_1_1_branch.html">Branch</a> container that contains all the nodes of the tree. </p>

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<a id="ad206e1e34981df417ef25dd65ee3e8cd"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ad206e1e34981df417ef25dd65ee3e8cd">&#9670;&nbsp;</a></span>fascicle_angles_</h2>

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          <td class="memname">std::vector&lt;Real&gt; SPH::NetworkTree::fascicle_angles_ = {-1.5, 0.2}</td>
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<p>angles with respect to the initial branches of the fascicles. </p>

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<a id="a605546cf821fd8dbbc30411965b4cedd"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a605546cf821fd8dbbc30411965b4cedd">&#9670;&nbsp;</a></span>fascicle_ratio_</h2>

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          <td class="memname">Real SPH::NetworkTree::fascicle_ratio_ = 20.0</td>
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<p>ratio of length of the fascicles. Include one per fascicle to include. </p>

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<h2 class="memtitle"><span class="permalink"><a href="#a1c9fce9cf85cebb4dd6414f83ae26874">&#9670;&nbsp;</a></span>fascicles_</h2>

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          <td class="memname"><a class="el" href="classbool.html">bool</a> SPH::NetworkTree::fascicles_ = true</td>
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<p>Create fascicles? </p>

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<h2 class="memtitle"><span class="permalink"><a href="#a0a818aa5f7e2078da5194505aaa88c6a">&#9670;&nbsp;</a></span>last_branch</h2>

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          <td class="memname"><a class="el" href="classint.html">int</a> SPH::NetworkTree::last_branch</td>
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<p>index of last <a class="el" href="class_s_p_h_1_1_branch.html">Branch</a>. </p>

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<h2 class="memtitle"><span class="permalink"><a href="#a81cec0f27e13b0c7a55745af4206d55d">&#9670;&nbsp;</a></span>length_</h2>

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<p>edian length of the branches. </p>

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<h2 class="memtitle"><span class="permalink"><a href="#a63ffd36144efdc6566a793e4cf47816b">&#9670;&nbsp;</a></span>length_min_</h2>

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<p>inimum length of the branches. To avoid randomly generated negative lengths </p>

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<p>standard deviation of the length. Set to zero to avoid random lengths </p>

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<h2 class="memtitle"><span class="permalink"><a href="#a5d7da958714fdda8648819479bab4da4">&#9670;&nbsp;</a></span>n_it_</h2>

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          <td class="memname"><a class="el" href="classint.html">int</a> SPH::NetworkTree::n_it_ = 25</td>
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<p>Number of iterations (generations of branches. </p>

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<h2 class="memtitle"><span class="permalink"><a href="#a6dc3553341fdb09fe95c988af35c560e">&#9670;&nbsp;</a></span>node_</h2>

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          <td class="memname"><a class="el" href="class_s_p_h_1_1_node.html">Node</a>* SPH::NetworkTree::node_</td>
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<p><a class="el" href="class_s_p_h_1_1_node.html" title="A class containing the nodes of the branches plus some fuctions to compute distance related quantitie...">Node</a> container that contains all the nodes of the tree. </p>

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<hr/>The documentation for this class was generated from the following files:<ul>
<li>SPHINXsys/src/shared/network/<a class="el" href="network_8h_source.html">network.h</a></li>
<li>SPHINXsys/src/shared/network/network.cpp</li>
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